Research workbench
Crystal structure of C-terminal half of bacterial HEN1
Analyse Crystal structure of C-terminal half of bacterial HEN1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4DQZ
- Type
- protein
- Length
- 342 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Methyltransferase type 12
- UniProt
- A3DJ37
- Pockets
- 5 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Methyltransferase type 12 | protein | 171 | 36% helix, 33% strand | A3DJ37 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 185 | 0.53 | 0.79 | 29 | empty |
| 2 | 138 | 0.49 | 0.79 | 21 | empty |
| 3 | 107 | 0.44 | 0.78 | 20 | empty |
| 4 | 93 | 0.40 | 0.77 | 15 | empty |
| 5 | 50 | 0.31 | 0.76 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 1029 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 4DQZ · Crystal Structure of C-terminal Half of Bacterial Hen1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3DJ37
- Elsewhere: RCSB PDB 4DQZ · PDBe 4DQZ · UniProt A3DJ37
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