Research workbench
Structure of editosome protein
Analyse Structure of editosome protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4DNI
- Type
- protein
- Length
- 257 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fusion protein of RNA-editing complex proteins MP42 and MP18
- UniProt
- Q95W13, Q38B90
- Pockets
- 4 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fusion protein of RNA-editing complex proteins MP42 and MP18 | protein | 257 | 11% helix, 52% strand | Q95W13, Q38B90 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 214 | 0.52 | 0.77 | 32 | empty |
| 2 | 157 | 0.46 | 0.76 | 27 | empty |
| 3 | 80 | 0.43 | 0.80 | 19 | empty |
| 4 | 122 | 0.37 | 0.74 | 19 | empty |
Compared structures
- 4DNI · Structure of Editosome protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q95W13
- Every structure of UniProt Q38B90
- Elsewhere: RCSB PDB 4DNI · PDBe 4DNI · UniProt Q95W13 · UniProt Q38B90
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