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Methylation of the ecori recognition site does not alter DNA conformation. the crystal structure of D(CGCGAM6ATTCGCG) at 2.0 ångströms resolution
Analyse Methylation of the ecori recognition site does not alter DNA conformation. the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4DNB
- Type
- DNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*CP*GP*CP*GP*AP*(6MA) P*TP*TP*CP*GP*CP*G)-3')
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(*CP*GP*CP*GP*AP*(6MA) P*TP*TP*CP*GP*CP*G)-3') | dna | 12 | — | — |
Interfaces
1 interface between chains.
- A–B · 575 Ų buried · 58 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 4DNB · Methylation of the ecori recognition site does not alter DNA conformation. the crystal… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4DNB · PDBe 4DNB
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