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Crystal structure of a putative pilus assembly protein (cpae) from burkholderia thailandensis E264 at 2.80 a resolution

Analyse Crystal structure of a putative pilus assembly protein (cpae) from burkholderia… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4DN6
Type: protein
Length: 248 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative pilus assembly protein cpae
UniProt: Q2T2Y8
Pockets: 2 · best druggability 0.62

Structure

x-ray diffraction · 2 distinct chains · 46% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative pilus assembly protein cpae	protein	126	46% helix, 23% strand	Q2T2Y8
B	Putative pilus assembly protein cpae	protein	122	45% helix, 24% strand	Q2T2Y8

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	265	0.62	0.81	40	empty
2	58	0.35	0.78	18	empty

Interfaces

1 interface between chains.

A–B · 805 Å² buried · 14 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

4DN6 · Crystal structure of a putative pilus assembly protein (cpaE) from Burkholderia… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q2T2Y8
Elsewhere: RCSB PDB 4DN6 · PDBe 4DN6 · UniProt Q2T2Y8

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