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Crystal structure of an amidohydrolase (COG3618) from burkholderia multivorans (target efi-500235) with bound zn, space group P212121

Analyse Crystal structure of an amidohydrolase (COG3618) from burkholderia multivorans… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4DLM
Type: protein
Length: 287 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Amidohydrolase 2
UniProt: A9ANE4
Ligands: ZN
Pockets: 1 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 52% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Amidohydrolase 2	protein	287	52% helix, 14% strand	A9ANE4

Ligands and binding sites

ZN · Zinc ion · metal · 7 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	203	0.61	0.82	25	empty

Compared structures

4DLM · Crystal structure of an amidohydrolase (COG3618) from burkholderia multivorans (TARGET… · the same entry in another collection · chain A against A, TM-score 1.00

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A9ANE4
Elsewhere: RCSB PDB 4DLM · PDBe 4DLM · UniProt A9ANE4

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