Research workbench
Hin recombinase bound to DNA: the origin of specificity in major and minor groove interactions
Analyse Hin recombinase bound to DNA: the origin of specificity in major and minor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1HCR
- Type
- protein + DNA
- Length
- 79 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'- D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3'); DNA (5'…
- UniProt
- P03013
Structure
x-ray diffraction · 3 distinct chains · 48% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | DNA (5'- D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3') | dna | 14 | — | — |
| C | DNA (5'- D(*TP*CP*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3') | dna | 13 | — | — |
| A | Protein (hin recombinase) | protein | 52 | 48% helix, 2% strand | P03013 |
Interfaces
3 interfaces between chains.
- B–A · 829 Ų buried · 19 hydrogen bonds · protein-nucleic
- C–A · 776 Ų buried · 14 hydrogen bonds · protein-nucleic
- B–C · 572 Ų buried · 67 hydrogen bonds · nucleic-nucleic
Compared structures
- 1HCR · Hin recombinase bound to DNA: the origin of specificity in major and minor groove… · the same entry in another collection · chain B against B, TM-score 1.00
- P03013 · AlphaFold monomer V2.0 prediction for DNA-invertase hin (P03013) · a predicted model of the same protein · chain A against A, TM-score 0.79
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03013
- Elsewhere: RCSB PDB 1HCR · PDBe 1HCR · UniProt P03013
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