Research workbench
Crystal structure of wt human crmp-4 from lattice translocation
Analyse Crystal structure of wt human crmp-4 from lattice translocation in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4CNU
- Type
- protein
- Length
- 976 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dihydropyrimidinase-like 3
- UniProt
- Q14195
- Pockets
- 4 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Dihydropyrimidinase-like 3 | protein | 488 | 35% helix, 23% strand | Q14195 |
Pockets
4 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 277 | 0.67 | 0.83 | 43 | empty |
| 2 | 281 | 0.67 | 0.83 | 42 | empty |
| 3 | 182 | 0.59 | 0.82 | 22 | empty |
| 4 | 182 | 0.58 | 0.81 | 24 | empty |
Compared structures
- 4CNU · CRYSTAL STRUCTURE OF WT HUMAN CRMP-4 from lattice translocation · the same entry in another collection · chain A against A, TM-score 1.00
- Q14195 · AlphaFold monomer V2.0 prediction for dihydropyrimidinase-related protein 3 (Q14195) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14195
- Elsewhere: RCSB PDB 4CNU · PDBe 4CNU · UniProt Q14195
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