Research workbench
An intertwined homodimer of the PDZ homology domain of AHNAK2
Analyse An intertwined homodimer of the PDZ homology domain of AHNAK2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4CN0
- Type
- protein
- Length
- 180 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein AHNAK2
- UniProt
- Q8IVF2
- Ligands
- K
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein AHNAK2 | protein | 87 | 17% helix, 40% strand | Q8IVF2 |
| B | Protein AHNAK2 | protein | 93 | 15% helix, 38% strand | Q8IVF2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 3861 Ų buried · 74 hydrogen bonds · protein-protein
Compared structures
- 4CN0 · An intertwined homodimer of the PDZ homology domain of AHNAK2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8IVF2
- Elsewhere: RCSB PDB 4CN0 · PDBe 4CN0 · UniProt Q8IVF2
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