Research workbench
T. potens iscr
Analyse T. potens iscr in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4CIC
- Type
- protein
- Length
- 281 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator, BADM/RRF2 family; Hexa-alanine peptide
- UniProt
- D5X843
- Ligands
- NA
Structure
x-ray diffraction · 3 distinct chains · 57% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator, BADM/RRF2 family | protein | 138 | 57% helix, 9% strand | D5X843 |
| B | Transcriptional regulator, BADM/RRF2 family | protein | 137 | 58% helix, 10% strand | D5X843 |
| Q | Hexa-alanine peptide | protein | 6 | 0% helix, 50% strand | — |
Ligands and binding sites
- NA · Sodium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
3 interfaces between chains.
- A–B · 1833 Ų buried · 5 hydrogen bonds · protein-protein
- B–Q · 297 Ų buried · 8 hydrogen bonds · protein-protein
- A–Q · 261 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 4CIC · T. potens IscR · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D5X843
- Elsewhere: RCSB PDB 4CIC · PDBe 4CIC · UniProt D5X843
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