Research workbench
Crystal structure of acrb-acrz complex
Analyse Crystal structure of acrb-acrz complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4CDI
- Type
- protein
- Length
- 1,078 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acriflavine resistance protein B; Predicted protein
- UniProt
- P31224, C4ZXT3
- Pockets
- 12 · best druggability 0.82
Structure
x-ray diffraction · 2 distinct chains · 54% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acriflavine resistance protein B | protein | 1032 | 54% helix, 17% strand | P31224 |
| C | Predicted protein | protein | 46 | 74% helix, 0% strand | C4ZXT3 |
Pockets
12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 942 | 0.82 | 0.83 | 129 | empty |
| 2 | 162 | 0.78 | 0.94 | 39 | empty |
| 3 | 204 | 0.66 | 0.85 | 28 | empty |
| 4 | 72 | 0.65 | 0.93 | 27 | empty |
| 5 | 275 | 0.65 | 0.81 | 35 | empty |
Interfaces
1 interface between chains.
- A–C · 1361 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31224
- Every structure of UniProt C4ZXT3
- Elsewhere: RCSB PDB 4CDI · PDBe 4CDI · UniProt P31224 · UniProt C4ZXT3
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