Research workbench
Crystal structure of the minimal pho-sfmbt complex (P6122 spacegroup)
Analyse Crystal structure of the minimal pho-sfmbt complex (P6122 spacegroup) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4C5G
- Type
- protein
- Length
- 471 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Polycomb protein sfmbt; Polycomb protein pho
- UniProt
- Q9VK33, Q8ST83
- Pockets
- 1 · best druggability 0.81
Structure
x-ray diffraction · 2 distinct chains · 15% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polycomb protein sfmbt | protein | 441 | 16% helix, 29% strand | Q9VK33 |
| B | Polycomb protein pho | protein | 30 | 0% helix, 67% strand | Q8ST83 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 692 | 0.81 | 0.85 | 74 | empty |
Interfaces
1 interface between chains.
- A–B · 965 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 4C5G · Crystal structure of the minimal Pho-Sfmbt complex (P6122 spacegroup) · the same entry in another collection · chain A against A, TM-score 1.00
- Q9VK33 · AlphaFold monomer V2.0 prediction for polycomb protein sfmbt (Q9VK33) · a predicted model of the same protein · chain A against A, TM-score 1.00
- Q8ST83 · AlphaFold monomer V2.0 prediction for polycomb protein pho (Q8ST83) · a predicted model of the same protein · chain B against A, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VK33
- Every structure of UniProt Q8ST83
- Elsewhere: RCSB PDB 4C5G · PDBe 4C5G · UniProt Q9VK33 · UniProt Q8ST83
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