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Complete crystal structure of the carboxylesterase cest- 2923 (LP_2923) from lactobacillus plantarum WCFS1
Analyse Complete crystal structure of the carboxylesterase cest- 2923 (LP_2923) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4BZW
- Type
- protein
- Length
- 550 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- LIPASE/ESTERASE
- EC
- 3.1.1.1
- UniProt
- F9US10
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.35
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | LIPASE/ESTERASE (EC 3.1.1.1) | protein | 275 | 33% helix, 21% strand | F9US10 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 9 copies · chains A, B
- ACT · Acetate ion · additive · 3 copies · chains B
- 144 · Tris-hydroxymethyl-methyl-ammonium · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.35 | 0.75 | 17 | SO4 |
| 2 | 62 | 0.35 | 0.77 | 18 | SO4 |
Interfaces
1 interface between chains.
- A–B · 1019 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 4BZW · Complete crystal structure of the carboxylesterase Cest-2923 (lp_2923) from Lactobacillus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F9US10
- Elsewhere: RCSB PDB 4BZW · PDBe 4BZW · UniProt F9US10
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