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Human short coiled coil protein

Analyse Human short coiled coil protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4BWD
Type: protein
Length: 182 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Short coiled-coil protein
UniProt: Q9UIL1
Pockets: 1 · best druggability 0.37

Structure

x-ray diffraction · 2 distinct chains · 90% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	Short coiled-coil protein	protein	61	90% helix, 0% strand	Q9UIL1
B	Short coiled-coil protein	protein	60	90% helix, 0% strand	Q9UIL1

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	99	0.37	0.75	15	empty

Interfaces

3 interfaces between chains.

A–B · 1420 Å² buried · 12 hydrogen bonds · protein-protein
A–C · 323 Å² buried · 2 hydrogen bonds · protein-protein
B–C · 315 Å² buried · 2 hydrogen bonds · protein-protein

Compared structures

4BWD · Human short coiled coil protein · the same entry in another collection · chain A against A, TM-score 1.00
Q9UIL1 · AlphaFold monomer V2.0 prediction for short coiled-coil protein (Q9UIL1) · a predicted model of the same protein · chain B against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9UIL1
Elsewhere: RCSB PDB 4BWD · PDBe 4BWD · UniProt Q9UIL1

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