Research workbench
Acetolactate decarboxylase with a bound (2R,3R)-2,3- dihydroxy-2-methylbutanoic acid
Analyse Acetolactate decarboxylase with a bound (2R,3R)-2,3- dihydroxy-2-methylbutanoic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4BT3
- Type
- protein
- Length
- 236 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alpha-acetolactate decarboxylase
- EC
- 4.1.1.5
- UniProt
- P23616
- Ligands
- WTZ, ZN
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alpha-acetolactate decarboxylase (EC 4.1.1.5) | protein | 236 | 22% helix, 43% strand | P23616 |
Ligands and binding sites
- WTZ · (2R,3R)-2,3-Dihydroxy-2-methylbutanoic acid · ligand · chains A
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 72 | 0.37 | 0.78 | 19 | empty |
Compared structures
- 4BT3 · acetolactate decarboxylase with a bound (2R,3R)-2,3-Dihydroxy-2- methylbutanoic acid · the same entry in another collection · chain A against A, TM-score 1.00
- P23616 · AlphaFold monomer V2.0 prediction for alpha-acetolactate decarboxylase (P23616) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P23616
- Elsewhere: RCSB PDB 4BT3 · PDBe 4BT3 · UniProt P23616
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