Research workbench
Mub is an aaaplus ATPase that forms helical filaments to control target selection for DNA transposition
Analyse Mub is an aaaplus ATPase that forms helical filaments to control target… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4BT0
- Type
- protein
- Length
- 246 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator
- UniProt
- O67198
- Ligands
- ADP
- Pockets
- 3 · best druggability 0.46
Structure
electron microscopy · 2 distinct chains · 43% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator | protein | 73 | 63% helix, 5% strand | O67198 |
| B | Transcriptional regulator | protein | 173 | 35% helix, 17% strand | O67198 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 105 | 0.46 | 0.79 | 23 | empty |
| 2 | 132 | 0.40 | 0.75 | 23 | empty |
| 3 | 61 | 0.36 | 0.78 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 629 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 4BT0 · MuB is an AAAplus ATPase that forms helical filaments to control target selection for DNA… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O67198
- Elsewhere: RCSB PDB 4BT0 · PDBe 4BT0 · UniProt O67198
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