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Mub is an aaaplus ATPase that forms helical filaments to control target selection for DNA transposition

Analyse Mub is an aaaplus ATPase that forms helical filaments to control target… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4BS1
Type: protein
Length: 246 residues
Chains: 2
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcriptional regulator (ntrc family)
Ligands: ADP
Pockets: 3 · best druggability 0.46

Structure

electron microscopy · 2 distinct chains · 43% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcriptional regulator (ntrc family)	protein	73	63% helix, 5% strand	—
B	Transcriptional regulator (ntrc family)	protein	173	35% helix, 17% strand	—

Ligands and binding sites

ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	116	0.46	0.78	21	empty
2	141	0.44	0.76	26	empty
3	59	0.39	0.80	13	empty

Interfaces

1 interface between chains.

A–B · 621 Å² buried · 6 hydrogen bonds · protein-protein

Compared structures

4BS1 · MuB is an AAAplus ATPase that forms helical filaments to control target selection for DNA… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 4BS1 · PDBe 4BS1

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