Research workbench

Crystal structure of chorismatase at 1.08 ångström resolution.

Analyse Crystal structure of chorismatase at 1.08 ångström resolution. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4BPS
Type: protein
Length: 331 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Fkbo
UniProt: Q9KID9
Ligands: 3EB
Pockets: 2 · best druggability 0.74

Structure

x-ray diffraction · 1 distinct chain · 25% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Fkbo	protein	331	25% helix, 35% strand	Q9KID9

Ligands and binding sites

3EB · 3-(2-carboxyethyl)benzoic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	115	0.74	0.94	31	3EB
2	93	0.34	0.74	18	empty

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

4BPS · Crystal structure of Chorismatase at 1.08 Angstrom resolution. · the same entry in another collection · chain A against A, TM-score 1.00
Q9KID9 · AlphaFold monomer V2.0 prediction for chorismatase (Q9KID9) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9KID9
Elsewhere: RCSB PDB 4BPS · PDBe 4BPS · UniProt Q9KID9

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.