Research workbench
Structure of cssb subunit complemented with donor strand from cssa subunit of enterotoxigenic escherichia COLI colonization factor CS6
Analyse Structure of cssb subunit complemented with donor strand from cssa subunit of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4B9G
- Type
- protein
- Length
- 292 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- CS6 fimbrial subunit B, CS6 fimbrial subunit a
- UniProt
- P53510, P53508
- Pockets
- 2 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 60% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | CS6 fimbrial subunit B, CS6 fimbrial subunit a | protein | 146 | 3% helix, 60% strand | P53510, P53508 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.46 | 0.79 | 18 | empty |
| 2 | 107 | 0.44 | 0.78 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 701 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 4B9G · Structure of CssB subunit complemented with donor strand from CssA subunit of… · the same entry in another collection · chain A against A, TM-score 1.00
- P53510 · AlphaFold monomer V2.0 prediction for CS6 fimbrial subunit B (P53510) · a predicted model of the same protein · chain B against A, TM-score 0.86
- P53508 · AlphaFold monomer V2.0 prediction for CS6 fimbrial subunit a (P53508) · a predicted model of the same protein · chain B against A, TM-score 0.66
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53510
- Every structure of UniProt P53508
- Elsewhere: RCSB PDB 4B9G · PDBe 4B9G · UniProt P53510 · UniProt P53508
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.