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RIMP_ALPHA_SV40TAGNLS

Analyse RIMP_ALPHA_SV40TAGNLS in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4B8O
Type: protein
Length: 438 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Importin subunit alpha-1A; SV40TAGNLS
UniProt: Q71VM4

Structure

x-ray diffraction · 3 distinct chains · 72% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Importin subunit alpha-1A	protein	422	75% helix, 0% strand	Q71VM4
B	SV40TAGNLS	protein	11	0% helix, 0% strand	—
C	SV40TAGNLS	protein	5	0% helix, 0% strand	—

Interfaces

2 interfaces between chains.

A–B · 781 Å² buried · 21 hydrogen bonds · protein-protein
A–C · 550 Å² buried · 15 hydrogen bonds · protein-protein

Compared structures

4B8O · rImp_alpha_SV40TAgNLS · the same entry in another collection · chain A against A, TM-score 1.00
Q71VM4 · AlphaFold monomer V2.0 prediction for importin subunit alpha-1A (Q71VM4) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q71VM4
Elsewhere: RCSB PDB 4B8O · PDBe 4B8O · UniProt Q71VM4

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