Research workbench
Structure of the tatc core of the twin arginine protein translocation system
Analyse Structure of the tatc core of the twin arginine protein translocation system in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4B4A
- Type
- protein
- Length
- 225 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sec-independent protein translocase protein tatc
- UniProt
- O67305
- Ligands
- LMN
- Pockets
- 3 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sec-independent protein translocase protein tatc | protein | 225 | 74% helix, 2% strand | O67305 |
Ligands and binding sites
- LMN · Lauryl Maltose Neopentyl Glycol · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 132 | 0.47 | 0.77 | 17 | empty |
| 2 | 134 | 0.45 | 0.76 | 19 | empty |
| 3 | 90 | 0.42 | 0.78 | 19 | empty |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 4B4A · Structure of the TatC core of the twin arginine protein translocation system · the same entry in another collection · chain A against A, TM-score 1.00
- O67305 · AlphaFold monomer V2.0 prediction for sec-independent protein translocase protein tatc… · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O67305
- Elsewhere: RCSB PDB 4B4A · PDBe 4B4A · UniProt O67305
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