Research workbench
Murine epidermal fatty acid-binding protein (FABP5) in complex with the endocannabinoid 2-arachidonoylglycerol
Analyse Murine epidermal fatty acid-binding protein (FABP5) in complex with the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4AZQ
- Type
- protein
- Length
- 136 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fatty acid-binding protein, epidermal
- UniProt
- Q05816
- Ligands
- G2A, CL
- Pockets
- 1 · best druggability 0.82
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fatty acid-binding protein, epidermal | protein | 136 | 15% helix, 57% strand | Q05816 |
Ligands and binding sites
- G2A · 2-hydroxy-1-(hydroxymethyl)ethyl icosanoate · ligand · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 375 | 0.82 | 0.90 | 38 | G2A |
Compared structures
- 4AZQ · Murine epidermal fatty acid-binding protein (FABP5) in complex with the endocannabinoid… · the same entry in another collection · chain A against A, TM-score 1.00
- Q05816 · AlphaFold monomer V2.0 prediction for fatty acid-binding protein 5 (Q05816) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q05816
- Elsewhere: RCSB PDB 4AZQ · PDBe 4AZQ · UniProt Q05816
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