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Corynebacterium glutamicum acnr au derivative structure

Analyse Corynebacterium glutamicum acnr au derivative structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4AC6
Type: protein
Length: 176 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hth-type transcriptional repressor acnr
UniProt: Q8NQ97
Ligands: AU
Pockets: 3 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain · 81% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hth-type transcriptional repressor acnr	protein	176	81% helix, 1% strand	Q8NQ97

Ligands and binding sites

AU · Gold ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	99	0.57	0.86	17	AU
2	216	0.53	0.77	23	empty
3	50	0.48	0.86	13	AU

Compared structures

4AC6 · Corynebacterium glutamicum AcnR AU derivative structure · the same entry in another collection · chain A against A, TM-score 1.00
Q8NQ97 · AlphaFold monomer V2.0 prediction for hth-type transcriptional repressor acnr (Q8NQ97) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8NQ97
Elsewhere: RCSB PDB 4AC6 · PDBe 4AC6 · UniProt Q8NQ97

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