Research workbench

N-terminal domain of S. pombe CDC23 apc subunit

Analyse N-terminal domain of S. pombe CDC23 apc subunit in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3ZN3
Type: protein
Length: 246 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Anaphase-promoting complex subunit 8
UniProt: O94556
Ligands: HG

Structure

x-ray diffraction · 1 distinct chain · 74% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Anaphase-promoting complex subunit 8	protein	246	74% helix, 0% strand	O94556

Ligands and binding sites

HG · Mercury (II) ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

3ZN3 · N-terminal domain of S. pombe Cdc23 APC subunit · the same entry in another collection · chain A against A, TM-score 1.00
O94556 · AlphaFold monomer V2.0 prediction for anaphase-promoting complex subunit 8 (O94556) · a predicted model of the same protein · chain A against A, TM-score 0.79

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O94556
Elsewhere: RCSB PDB 3ZN3 · PDBe 3ZN3 · UniProt O94556

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.