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Crystal structure of AFCSX3 in complex with ssrna

Analyse Crystal structure of AFCSX3 in complex with ssrna in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3WZI
Type: protein + RNA
Length: 216 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein AF_1864; Ssrna
UniProt: O28415

Structure

x-ray diffraction · 2 distinct chains · 18% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Uncharacterized protein AF_1864	protein	106	18% helix, 34% strand	O28415
C	Ssrna	rna	4	—	—

Interfaces

3 interfaces between chains.

A–B · 1092 Å² buried · 8 hydrogen bonds · protein-protein
B–C · 501 Å² buried · 10 hydrogen bonds · protein-nucleic
A–C · 464 Å² buried · 5 hydrogen bonds · protein-nucleic

Compared structures

3WZI · Crystal structure of AfCsx3 in complex with ssRNA · the same entry in another collection · chain A against A, TM-score 1.00
O28415 · AlphaFold monomer V2.0 prediction for uncharacterized protein AF_1864 (O28415) · a predicted model of the same protein · chain A against A, TM-score 0.94

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O28415
Elsewhere: RCSB PDB 3WZI · PDBe 3WZI · UniProt O28415

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