Research workbench
Crystal structures of SER86ASP and MET148LEU rusticyanin
Analyse Crystal structures of SER86ASP and MET148LEU rusticyanin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1GY1
- Type
- protein
- Length
- 308 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rusticyanin
- UniProt
- P24930
- Ligands
- CU
- Pockets
- 1 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Rusticyanin | protein | 154 | 7% helix, 42% strand | P24930 |
Ligands and binding sites
- CU · Copper (II) ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 261 | 0.67 | 0.83 | 31 | empty |
Interfaces
1 interface between chains.
- A–B · 467 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 1GY1 · Crystal structures of Ser86Asp and Met148Leu Rusticyanin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24930
- Elsewhere: RCSB PDB 1GY1 · PDBe 1GY1 · UniProt P24930
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