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Crystal structure of carbohydrate recognition domain of blood dendritic cell antigen-2 (BDCA2) lectin (crystal form-2)
Analyse Crystal structure of carbohydrate recognition domain of blood dendritic cell… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3WBQ
- Type
- protein
- Length
- 250 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- C-type lectin domain family 4 member C
- UniProt
- Q8WTT0
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | C-type lectin domain family 4 member C | protein | 126 | 14% helix, 37% strand | Q8WTT0 |
| B | C-type lectin domain family 4 member C | protein | 124 | 18% helix, 38% strand | Q8WTT0 |
Interfaces
1 interface between chains.
- A–B · 2180 Ų buried · 34 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 3WBQ · Crystal structure of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8WTT0 · AlphaFold monomer V2.0 prediction for C-type lectin domain family 4 member C (Q8WTT0) · a predicted model of the same protein · chain A against A, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8WTT0
- Elsewhere: RCSB PDB 3WBQ · PDBe 3WBQ · UniProt Q8WTT0
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