Research workbench
C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59
Analyse C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3VCB
- Type
- protein
- Length
- 178 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA-directed RNA polymerase
- UniProt
- Q9J3E9
- Pockets
- 1 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 56% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | RNA-directed RNA polymerase | protein | 89 | 56% helix, 17% strand | Q9J3E9 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 157 | 0.61 | 0.84 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 1264 Ų buried · 20 hydrogen bonds · protein-protein
Compared structures
- 3VCB · C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9J3E9
- Elsewhere: RCSB PDB 3VCB · PDBe 3VCB · UniProt Q9J3E9
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