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Crystal structure of staphylococcus aureus biotin protein ligase in complex with inhibitor

Analyse Crystal structure of staphylococcus aureus biotin protein ligase in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3V7R
Type: protein
Length: 322 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Biotin ligase
UniProt: C8N5A9
Ligands: 32G
Pockets: 3 · best druggability 0.71

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Biotin ligase	protein	322	34% helix, 31% strand	C8N5A9

Ligands and binding sites

32G · (3aS,4S,6aR)-4-(5-{1-[4-(6-amino-9H-purin-9-yl)butyl]-1H-1,2,3-triazol-4-yl}pentyl)tetrahydro-1H-thieno[3,4-d]imidazol-2(3H)-one · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	264	0.71	0.86	43	32G
2	92	0.39	0.77	15	empty
3	65	0.35	0.77	14	empty

Compared structures

3V7R · Crystal structure of Staphylococcus aureus biotin protein ligase in complex with inhibitor · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C8N5A9
Elsewhere: RCSB PDB 3V7R · PDBe 3V7R · UniProt C8N5A9

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