Research workbench
Crystal structure of domain-swapped FAM96A minor dimer
Analyse Crystal structure of domain-swapped FAM96A minor dimer in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3UX3
- Type
- protein
- Length
- 260 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- MIP18 family protein FAM96A
- UniProt
- Q9H5X1
- Ligands
- ZN
- Pockets
- 3 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | MIP18 family protein FAM96A | protein | 130 | 49% helix, 22% strand | Q9H5X1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 200 | 0.81 | 0.95 | 35 | ACT |
| 2 | 65 | 0.28 | 0.73 | 13 | empty |
| 3 | 50 | 0.25 | 0.73 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 2093 Ų buried · 23 hydrogen bonds · protein-protein
Compared structures
- 3UX3 · Crystal Structure of Domain-Swapped Fam96a minor dimer · the same entry in another collection · chain A against A, TM-score 1.00
- Q9H5X1 · AlphaFold monomer V2.0 prediction for cytosolic iron-sulfur assembly component 2A (Q9H5X1) · a predicted model of the same protein · chain B against A, TM-score 0.71
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H5X1
- Elsewhere: RCSB PDB 3UX3 · PDBe 3UX3 · UniProt Q9H5X1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.