Research workbench
X-ray crystal structure of PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE family protein (BTH_I1489)FROM burkholderia thailandensis
Analyse X-ray crystal structure of PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE family protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3UW2
- Type
- protein
- Length
- 458 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE family protein
- UniProt
- Q2SYG4
- Ligands
- ZN, PO4
- Pockets
- 2 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE family protein | protein | 458 | 36% helix, 23% strand | Q2SYG4 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
- PO4 · Phosphate ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 6 copies · chains A
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 696 | 0.74 | 0.80 | 72 | PO4, EDO, GOL |
| 2 | 77 | 0.41 | 0.79 | 18 | empty |
Compared structures
- 3UW2 · X-ray Crystal Structure of Phosphoglucomutase/phosphomannomutase family protein… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2SYG4
- Elsewhere: RCSB PDB 3UW2 · PDBe 3UW2 · UniProt Q2SYG4
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