Research workbench
Crystal structure of the Q2S0R5 protein from salinibacter ruber, northeast structural genomics consortium target SRR207
Analyse Crystal structure of the Q2S0R5 protein from salinibacter ruber, northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3USH
- Type
- protein
- Length
- 238 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- Q2S0R5
- Ligands
- BR
- Pockets
- 2 · best druggability 0.58
Structure
x-ray diffraction · 2 distinct chains · 29% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 118 | 30% helix, 15% strand | Q2S0R5 |
| B | Uncharacterized protein | protein | 120 | 29% helix, 15% strand | Q2S0R5 |
Ligands and binding sites
- BR · Bromide ion · ion · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 361 | 0.58 | 0.76 | 53 | BR |
| 2 | 100 | 0.41 | 0.77 | 17 | BR |
Interfaces
1 interface between chains.
- A–B · 296 Ų buried · 4 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 10 modified, 4 disulfide (engineered, disulfide).
Compared structures
- 3USH · Crystal Structure of the Q2S0R5 protein from Salinibacter ruber, Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2S0R5
- Elsewhere: RCSB PDB 3USH · PDBe 3USH · UniProt Q2S0R5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.