Research workbench
Crystal structure of a putative cell adhesion protein (BACOVA_04980) from bacteroides ovatus atcc 8483 at 2.18 a resolution
Analyse Crystal structure of a putative cell adhesion protein (BACOVA_04980) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3UFI
- Type
- protein
- Length
- 278 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein BACOVA_04980
- UniProt
- A7M4D9
- Ligands
- SO4, CL
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 4% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein BACOVA_04980 | protein | 278 | 4% helix, 47% strand | A7M4D9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 275 | 0.53 | 0.75 | 35 | empty |
Modifications
Observed in the structure: 22 modified (methylation, engineered).
Compared structures
- 3UFI · Crystal structure of a putative cell adhesion protein (BACOVA_04980) from Bacteroides… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7M4D9
- Elsewhere: RCSB PDB 3UFI · PDBe 3UFI · UniProt A7M4D9
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