Research workbench
A RNA binding protein from crimean-congo hemorrhagic fever virus
Analyse A RNA binding protein from crimean-congo hemorrhagic fever virus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3U3I
- Type
- protein
- Length
- 460 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleocapsid protein
- UniProt
- Q3HLI8
- Pockets
- 3 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 57% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleocapsid protein | protein | 460 | 57% helix, 2% strand | Q3HLI8 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1095 | 0.80 | 0.81 | 74 | empty |
| 2 | 54 | 0.74 | 1.00 | 18 | empty |
| 3 | 144 | 0.40 | 0.74 | 20 | empty |
Compared structures
- 3U3I · A RNA binding protein from Crimean-Congo hemorrhagic fever virus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3HLI8
- Elsewhere: RCSB PDB 3U3I · PDBe 3U3I · UniProt Q3HLI8
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