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Crystal structure of N-terminal region of type III secretion first translocator ipab (residues 74-224)

Analyse Crystal structure of N-terminal region of type III secretion first translocator… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3U0C
Type: protein
Length: 302 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Invasin ipab
UniProt: P18011
Pockets: 1 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 91% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Invasin ipab	protein	151	91% helix, 0% strand	P18011

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	78	0.38	0.77	17	empty

Interfaces

1 interface between chains.

A–B · 1852 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

3U0C · Crystal structure of N-terminal region of Type III Secretion First Translocator IpaB… · the same entry in another collection · chain A against A, TM-score 1.00
P18011 · AlphaFold monomer V2.0 prediction for invasin ipab (P18011) · a predicted model of the same protein · chain A against A, TM-score 0.85

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P18011
Elsewhere: RCSB PDB 3U0C · PDBe 3U0C · UniProt P18011

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