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Crystal structure of the yersinia pestis dihydropteroate synthase.
Analyse Crystal structure of the yersinia pestis dihydropteroate synthase. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3TZN
- Type
- protein
- Length
- 455 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 7,8-dihydropteroate synthase
- EC
- 2.5.1.15
- UniProt
- Q7CKJ1
- Pockets
- 2 · best druggability 0.45
Structure
x-ray diffraction · 2 distinct chains · 50% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 7,8-dihydropteroate synthase (EC 2.5.1.15) | protein | 243 | 50% helix, 18% strand | Q7CKJ1 |
| B | 7,8-dihydropteroate synthase (EC 2.5.1.15) | protein | 212 | 50% helix, 17% strand | Q7CKJ1 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 93 | 0.45 | 0.80 | 21 | empty |
| 2 | 95 | 0.34 | 0.73 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 1087 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 3TZN · Crystal Structure of the Yersinia pestis Dihydropteroate synthase. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7CKJ1
- Elsewhere: RCSB PDB 3TZN · PDBe 3TZN · UniProt Q7CKJ1
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