Research workbench
Crystal structure of a probable tagatose 6 phosphate kinase from sinorhizobium meliloti 1021
Analyse Crystal structure of a probable tagatose 6 phosphate kinase from sinorhizobium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3TXV
- Type
- protein
- Length
- 387 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable tagatose 6-phosphate kinase
- EC
- 2.7.1.144
- UniProt
- Q92UY3
- Pockets
- 4 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 52% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable tagatose 6-phosphate kinase (EC 2.7.1.144) | protein | 387 | 52% helix, 12% strand | Q92UY3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 551 | 0.67 | 0.77 | 48 | empty |
| 2 | 106 | 0.46 | 0.80 | 23 | empty |
| 3 | 141 | 0.43 | 0.76 | 29 | empty |
| 4 | 66 | 0.30 | 0.73 | 14 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 3TXV · Crystal structure of a probable tagatose 6 phosphate kinase from Sinorhizobium meliloti… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92UY3
- Elsewhere: RCSB PDB 3TXV · PDBe 3TXV · UniProt Q92UY3
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