Research workbench
Structure of a class II fumarate hydratase from burkholderia pseudomallei
Analyse Structure of a class II fumarate hydratase from burkholderia pseudomallei in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3TV2
- Type
- protein
- Length
- 457 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fumarate hydratase, class II
- EC
- 4.2.1.2
- UniProt
- Q3JQ34
- Ligands
- NA, UNL
- Pockets
- 2 · best druggability 0.31
Structure
x-ray diffraction · 1 distinct chain · 60% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fumarate hydratase, class II (EC 4.2.1.2) | protein | 457 | 60% helix, 7% strand | Q3JQ34 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 61 | 0.31 | 0.75 | 11 | empty |
| 2 | 61 | 0.28 | 0.73 | 14 | empty |
Compared structures
- 3TV2 · Structure of a class II fumarate hydratase from Burkholderia pseudomallei · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3JQ34
- Elsewhere: RCSB PDB 3TV2 · PDBe 3TV2 · UniProt Q3JQ34
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.