Research workbench
Structure of the pto-binding domain of hoppmal generated by limited chymotrypsin digestion
Analyse Structure of the pto-binding domain of hoppmal generated by limited… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3TJY
- Type
- protein
- Length
- 78 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Effector protein HOPAB3
- UniProt
- Q8RP04
- Ligands
- CL, SO4
Structure
x-ray diffraction · 1 distinct chain · 69% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Effector protein HOPAB3 | protein | 78 | 69% helix, 0% strand | Q8RP04 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3TJY · Structure of the Pto-binding domain of HopPmaL generated by limited chymotrypsin digestion · the same entry in another collection · chain A against A, TM-score 1.00
- Q8RP04 · AlphaFold monomer V2.0 prediction for effector protein HOPAB3 (Q8RP04) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8RP04
- Elsewhere: RCSB PDB 3TJY · PDBe 3TJY · UniProt Q8RP04
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