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Solution structure of the N-terminal zinc finger of murine gata-1, NMR, 25 structures

Analyse Solution structure of the N-terminal zinc finger of murine gata-1, NMR, 25… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1GNF
Type: protein
Length: 46 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcription factor gata-1
UniProt: P17679
Ligands: ZN
Pockets: 1 · best druggability 0.29

Structure

solution nmr · 1 distinct chain · 17% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcription factor gata-1	protein	46	17% helix, 4% strand	P17679

Ligands and binding sites

ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.29	0.75	12	empty

Compared structures

1GNF · Solution structure of the N-terminal zinc finger of murine gata-1, NMR, 25 structures · the same entry in another collection · chain A against A, TM-score 1.00
P17679 · AlphaFold monomer V2.0 prediction for erythroid transcription factor (P17679) · a predicted model of the same protein · chain A against A, TM-score 0.64

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P17679
Elsewhere: RCSB PDB 1GNF · PDBe 1GNF · UniProt P17679

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