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Crystal structure of riss periplasmic domain at low pH dimer with N- termini ordered

Analyse Crystal structure of riss periplasmic domain at low pH dimer with N- termini… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3TE8
Type: protein
Length: 240 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Sensor histidine kinase riss
EC: 2.7.13.3
UniProt: Q3JRA3
Pockets: 3 · best druggability 0.57

Structure

x-ray diffraction · 2 distinct chains · 43% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Sensor histidine kinase riss (EC 2.7.13.3)	protein	115	44% helix, 25% strand	Q3JRA3
B	Sensor histidine kinase riss (EC 2.7.13.3)	protein	125	42% helix, 25% strand	Q3JRA3

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	215	0.57	0.79	29	empty
2	92	0.38	0.76	16	empty
3	69	0.31	0.75	18	empty

Interfaces

1 interface between chains.

A–B · 1021 Å² buried · 10 hydrogen bonds · protein-protein

Compared structures

3TE8 · Crystal structure of risS periplasmic domain at low pH dimer with N-termini ordered · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3JRA3
Elsewhere: RCSB PDB 3TE8 · PDBe 3TE8 · UniProt Q3JRA3

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