Research workbench
Crystal structure of glucosamine-6-phosphate N-acetyltransferase from arabidopsis thaliana
Analyse Crystal structure of glucosamine-6-phosphate N-acetyltransferase from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3T90
- Type
- protein
- Length
- 147 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glucose-6-phosphate acetyltransferase 1
- UniProt
- Q9LFU9
- Ligands
- NA
- Pockets
- 3 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucose-6-phosphate acetyltransferase 1 | protein | 147 | 37% helix, 26% strand | Q9LFU9 |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 250 | 0.56 | 0.77 | 29 | empty |
| 2 | 128 | 0.44 | 0.77 | 17 | empty |
| 3 | 134 | 0.42 | 0.75 | 23 | EPE |
Compared structures
- 3T90 · Crystal structure of glucosamine-6-phosphate N-acetyltransferase from Arabidopsis thaliana · the same entry in another collection · chain A against A, TM-score 1.00
- Q9LFU9 · AlphaFold monomer V2.0 prediction for glucosamine 6-phosphate N-acetyltransferase (Q9LFU9) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LFU9
- Elsewhere: RCSB PDB 3T90 · PDBe 3T90 · UniProt Q9LFU9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.