Research workbench
Crystal structure of pseudomonas aeruginosa OCCK5 (opdh)
Analyse Crystal structure of pseudomonas aeruginosa OCCK5 (opdh) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3T20
- Type
- protein
- Length
- 362 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cis-aconitate porin opdh
- UniProt
- Q9I5H4
- Pockets
- 3 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 61% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cis-aconitate porin opdh | protein | 362 | 2% helix, 61% strand | Q9I5H4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 721 | 0.68 | 0.76 | 75 | empty |
| 2 | 229 | 0.49 | 0.75 | 40 | empty |
| 3 | 59 | 0.33 | 0.77 | 17 | empty |
Compared structures
- 3T20 · Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I5H4
- Elsewhere: RCSB PDB 3T20 · PDBe 3T20 · UniProt Q9I5H4
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