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Crystal structure of a putative aminotransferase (NCGL2491) from corynebacterium glutamicum atcc 13032 at 1.60 a resolution

Analyse Crystal structure of a putative aminotransferase (NCGL2491) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3SNO
Type: protein
Length: 245 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical aminotransferase
EC: 2.6.1.42
UniProt: Q8NMJ3
Pockets: 2 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical aminotransferase (EC 2.6.1.42)	protein	245	28% helix, 36% strand	Q8NMJ3

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	97	0.45	0.79	16	EDO
2	132	0.37	0.73	20	empty

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

3SNO · Crystal structure of a putative aminotransferase (NCgl2491) from Corynebacterium… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8NMJ3
Elsewhere: RCSB PDB 3SNO · PDBe 3SNO · UniProt Q8NMJ3

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