Research workbench
Crystal structure of apo aminoglycoside-2''-phosphotransferase type iva
Analyse Crystal structure of apo aminoglycoside-2''-phosphotransferase type iva in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3SGC
- Type
- protein
- Length
- 296 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- APH(2'')-id
- UniProt
- O68183
- Pockets
- 3 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | APH(2'')-id | protein | 296 | 50% helix, 15% strand | O68183 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 923 | 0.73 | 0.77 | 75 | empty |
| 2 | 83 | 0.31 | 0.73 | 20 | empty |
| 3 | 60 | 0.31 | 0.75 | 14 | empty |
Compared structures
- 3SGC · Crystal Structure of Apo Aminoglycoside-2''-Phosphotransferase Type IVa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O68183
- Elsewhere: RCSB PDB 3SGC · PDBe 3SGC · UniProt O68183
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