Research workbench
Crystal structure of xcnags
Analyse Crystal structure of xcnags in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3S6K
- Type
- protein
- Length
- 438 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acetylglutamate kinase
- EC
- 2.3.1.1, 2.7.2.8
- UniProt
- Q4UVI7
- Pockets
- 3 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acetylglutamate kinase (EC 2.3.1.1, 2.7.2.8) | protein | 438 | 35% helix, 12% strand | Q4UVI7 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 596 | 0.72 | 0.80 | 70 | empty |
| 2 | 394 | 0.66 | 0.80 | 40 | empty |
| 3 | 305 | 0.60 | 0.78 | 45 | empty |
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 3S6K · Crystal structure of xcNAGS · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4UVI7
- Elsewhere: RCSB PDB 3S6K · PDBe 3S6K · UniProt Q4UVI7
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