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Crystal structure of a 7-bladed beta-propeller-like protein (EUBREC_1955) from eubacterium rectale atcc 33656 at 1.88 a resolution

Analyse Crystal structure of a 7-bladed beta-propeller-like protein (EUBREC_1955) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3S25
Type: protein
Length: 295 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical 7-bladed beta-propeller-like protein
UniProt: C4ZBG5
Pockets: 2 · best druggability 0.41

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 53% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical 7-bladed beta-propeller-like protein	protein	295	3% helix, 53% strand	C4ZBG5

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 11 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	125	0.41	0.76	22	EDO
2	55	0.25	0.73	20	EDO

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

3S25 · Crystal structure of a 7-bladed beta-propeller-like protein (EUBREC_1955) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C4ZBG5
Elsewhere: RCSB PDB 3S25 · PDBe 3S25 · UniProt C4ZBG5

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