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Crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in tomaymycin biosynthetic pathway
Analyse Crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3RY0
- Type
- protein
- Length
- 128 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative tautomerase
- UniProt
- C0LTT5
- Pockets
- 2 · best druggability 0.32
Structure
x-ray diffraction · 2 distinct chains · 48% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative tautomerase | protein | 65 | 48% helix, 28% strand | C0LTT5 |
| B | Putative tautomerase | protein | 63 | 49% helix, 29% strand | C0LTT5 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.32 | 0.74 | 14 | empty |
| 2 | 52 | 0.28 | 0.74 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 807 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 3RY0 · Crystal structure of TomN, a 4-Oxalocrotonate Tautomerase homologue in Tomaymycin… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C0LTT5
- Elsewhere: RCSB PDB 3RY0 · PDBe 3RY0 · UniProt C0LTT5
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