Research workbench
Crystal structure of yeast telomere protein CDC13 OB4
Analyse Crystal structure of yeast telomere protein CDC13 OB4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3RMH
- Type
- protein
- Length
- 260 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Yeast CDC13 OB4
- UniProt
- Q6FT40
- Pockets
- 2 · best druggability 0.81
Structure
x-ray diffraction · 2 distinct chains · 26% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Yeast CDC13 OB4 | protein | 127 | 28% helix, 38% strand | Q6FT40 |
| B | Yeast CDC13 OB4 | protein | 133 | 25% helix, 37% strand | Q6FT40 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 167 | 0.81 | 0.96 | 24 | empty |
| 2 | 86 | 0.39 | 0.77 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 1290 Ų buried · 21 hydrogen bonds · protein-protein
Compared structures
- 3RMH · Crystal Structure of yeast telomere protein Cdc13 OB4 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6FT40
- Elsewhere: RCSB PDB 3RMH · PDBe 3RMH · UniProt Q6FT40
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