Research workbench
Glutamine binding protein open ligand-free structure
Analyse Glutamine binding protein open ligand-free structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1GGG
- Type
- protein
- Length
- 440 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glutamine binding protein
- UniProt
- P10344
- Pockets
- 3 · best druggability 0.35
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Glutamine binding protein | protein | 220 | 36% helix, 28% strand | P10344 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 83 | 0.35 | 0.75 | 15 | empty |
| 2 | 92 | 0.33 | 0.74 | 20 | empty |
| 3 | 80 | 0.31 | 0.73 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 565 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 1GGG · Glutamine binding protein open ligand-free structure · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10344
- Elsewhere: RCSB PDB 1GGG · PDBe 1GGG · UniProt P10344
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