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Crystal structure of a putative SEL1 repeat protein (KPN_04481) from klebsiella pneumoniae subsp. pneumoniae at 1.65 a resolution

Analyse Crystal structure of a putative SEL1 repeat protein (KPN_04481) from klebsiella… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3RJV
Type: protein
Length: 208 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative SEL1 repeat protein
UniProt: A6TH02
Pockets: 1 · best druggability 0.55

Structure

x-ray diffraction · 1 distinct chain · 72% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative SEL1 repeat protein	protein	208	72% helix, 1% strand	A6TH02

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 7 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	265	0.55	0.77	23	empty

Modifications

Observed in the structure: 3 modified, 1 disulfide (engineered, disulfide).

Compared structures

3RJV · Crystal structure of a putative sel1 repeat protein (kpn_04481) from Klebsiella… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A6TH02
Elsewhere: RCSB PDB 3RJV · PDBe 3RJV · UniProt A6TH02

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